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Seg3D
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Seg3D is an open source interactive segmentation tool that mixes powerful ITK and NRRD based volumetric image analysis and segmentation tools, interactive painting, and advanced volume rendering. [
NIH/NCRR Center for Integrative Biomedical Computing Acknowledgment
Seg3D, and the data sets provided on this web site are Open Source software projects that are principally funded through the SCI Institute's NIH/NCRR CIBC. [Seg3D License] For us to secure the funding that allows us to continue providing this software, we must have evidence of its utility. Thus we ask users of our software and data to acknowledge us in their publications and inform us of these publications. Please use one of the following acknowledgments and send us references to any publications, presentations, or successful funding applications that make use of the NIH/NCRR CIBC software or data sets we provide:
Seg3D Citation: [bibtex citation] [Endnote citation]
Data set Citation: [bibtex citation] [Endnote citation]
"This work was made possible in part by software from the NIH/NCRR Center for Integrative Biomedical Computing, P41-RR12553-07."
Seg3D is an OpenGL-based viewer and editor of scientific voxel data. Users can simultaneously view multiple orthogonal, two-dimensional slices of the data and create segmentation masks (labeled images) using manual drawing tools and automated segmentation algorithms. Seg3D integrates powerful higher-dimensional image processing and segmentation algorithms from the Insight Toolkit such as anisotropic blurring, edge-detection, image statistics, flood filling, morphological operations, and level-set segmentation algorithms.
Seg3D Overview.
Seg3D License
Seg3D is available for free and open source under the MIT License
The MIT License Copyright (c) 2007 Scientific Computing and Imaging Institute, University of Utah. License for the specific language governing rights and limitations under Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to the following conditions: The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software. THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
